Basic Information
Locus ID:
Oco16G007060
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG16 | 11157105 | 11161676 | + | Oco16G007060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.71 | 52,333.25 Da | 39.47 | 101.31 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 140 | 168 | 0.001 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 137 | 199 | 5.1E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 263 | 423 | 4.32E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 155 | 448 | 7.9E-7 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 120 | 139 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G38390.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_015649379.1 | putative F-box/LRR-repeat protein At5g02700 [Oryza sativa Japonica Group] | 0 |
| Q9FF23 | Putative F-box protein At5g38390 OS=Arabidopsis thaliana OX=3702 GN=At5g38390 PE=4 SV=1 | 0 | |
| TrEMBL | B9G0M8 | F-box domain-containing protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_27122 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology