Basic Information
Locus ID:
Oco16G007050
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG16 | 11146593 | 11147674 | + | Oco16G007050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 33,418.46 Da | 41.34 | 100.75 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 103 | 214 | 8.4E-6 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 86 | 214 | 4.1E-14 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 57 | 227 | 1.2E-12 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 34 | 319 | 9.997698 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_015649146.1 | leucine-rich repeat receptor protein kinase EMS1 [Oryza sativa Japonica Group] | 0 |
| TrEMBL | A0A6G1CFF2 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_012609 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg20250 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_290 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah018105 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_8g182480 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg48849 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg28079 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00017094 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl46004, Sgl50698 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000034460 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0005930, CQ.Regalona.r1.8BG0006080 |
| Apiaceae | Apium graveolens | 1 | Ag7G00791 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103713250 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.2857.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G18524 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G46080.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10000955m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp2g10930.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g062900.2N, BniB04g015950.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq01G2153 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl01G2395, Cgl01G2431 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno12g04060 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-941 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.898 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00005657 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb3G15681 |
| Poaceae | Echinochloa crus-galli | 2 | AH08.1428, CH08.1438 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0628260, gene-QOZ80_8BG0656800 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_031719 |
| Poaceae | Oryza coarctata | 2 | Oco15G007300, Oco16G007050 |
| Poaceae | Oryza sativa | 1 | LOC_Os08g28890.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_07G116600 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr20G007380, Chr29G006900 |
| Poaceae | Zea mays | 1 | Zm00001eb042630_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-42329 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g23995 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG18.1437, evm.TU.LG20.443 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc09g04390 |
| Salicaceae | Populus euphratica | 2 | populus_peu10015, populus_peu18123 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132626999 |
| Solanaceae | Solanum chilense | 1 | SOLCI002660800 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107001749 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_7366 |
| Tamaricaceae | Tamarix chinensis | 1 | TC07G1380 |