Basic Information
Locus ID:
Oco16G007040
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG16 | 11093438 | 11096653 | - | Oco16G007040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 104,184.66 Da | 39.01 | 104.67 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 122 | 137 | 0.55 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 678 | 892 | 1.9E-39 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 338 | 355 | 1.9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 64 | 2.9E-4 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 373 | 577 | 1.19E-42 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 238 | 1.77E-28 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 677 | 957 | 2.97E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 187 | 424 | 7.31E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 244 | 5.5E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 245 | 315 | 4.8E-14 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 659 | 767 | 8.2E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 187 | 5.3E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 316 | 598 | 9.1E-75 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 768 | 973 | 1.9E-55 | - |
| SMART | SM00369 | LRR_typ_2 | 483 | 507 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 97 | 120 | 400.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 674 | 975 | 1.1E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 170 | 194 | 63.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 219 | 243 | 29.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 121 | 144 | 92.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 531 | 555 | 95.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 674 | 975 | 35.368229 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 812 | 824 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 531 | 544 | 3.6E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 342 | 355 | 3.6E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_052166374.1 | receptor-like protein kinase HSL1 [Oryza glaberrima] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D3GZN4 | Protein kinase domain-containing protein OS=Oryza barthii OX=65489 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology