Basic Information
Locus ID:
Oco16G006130
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG16 | 8892179 | 8897584 | + | Oco16G006130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 74,518.25 Da | 50.92 | 91.35 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 344 | 638 | 4.4071E-121 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 313 | 624 | 2.0E-89 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 344 | 650 | 1.35E-67 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 347 | 643 | 9.2E-43 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 168 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 138 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 139 | 168 | - | - |
| Coils | Coil | Coil | 275 | 295 | - | - |
| Coils | Coil | Coil | 223 | 243 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_015651096.1 | probable galacturonosyltransferase 4 [Oryza sativa Japonica Group] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0LTT7 | Hexosyltransferase OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology