Basic Information
Locus ID:
Oco16G005360
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG16 | 6661707 | 6667860 | - | Oco16G005360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 29,707.86 Da | 55.16 | 89.77 | -0.22 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052166429.1 | putative F-box/LRR-repeat protein At5g38386 isoform X3 [Oryza glaberrima] | 0 |
| TrEMBL | A0A0E0LTA8 | F-box domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH08.1029 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0725660.1 |
| Poaceae | Oryza coarctata | 1 | Oco16G005360 |
| Poaceae | Oryza sativa | 4 | LOC_Os08g09700.1, LOC_Os08g18000.1, LOC_Os08g28940.1 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0402993 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC7AG056870, gene_TRIDC7AG056910 ... |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G408500.3, TraesCS7B02G308200.1 ... |