Basic Information
Locus ID:
Oco16G004260
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG16 | 4699187 | 4700236 | - | Oco16G004260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 38,481.48 Da | 39.19 | 81.66 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 37 | 81 | 1.9078E-4 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 177 | 281 | 5.8E-25 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 161 | 281 | 1.5E-33 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 35 | 149 | 2.45E-6 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 158 | 276 | 2.7E-37 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 28 | 148 | 6.1E-5 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 281 | 348 | 7.7E-17 | - |
| SMART | SM00225 | BTB_4 | 182 | 282 | 3.2E-23 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 182 | 252 | 18.306616 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_015648699.1 | BTB/POZ and MATH domain-containing protein 2 [Oryza sativa Japonica Group] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0EJC0 | BTB domain-containing protein OS=Oryza meridionalis OX=40149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology