Basic Information
Locus ID:
Oco16G004240
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
BTB POZ and MATH domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG16 | 4684378 | 4685052 | + | Oco16G004240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 25,417.03 Da | 35.23 | 97.50 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 59 | 170 | 8.2E-22 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 47 | 169 | 1.22E-21 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 39 | 197 | 3.9E-36 | IPR011333 |
| SMART | SM00225 | BTB_4 | 65 | 171 | 3.4E-18 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 65 | 132 | 15.431817 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03740.1 | BTB-POZ and MATH domain 4. | 0 |
| RefSeq | XP_015649222.1 | BTB/POZ and MATH domain-containing protein 2 [Oryza sativa Japonica Group] | 0 |
| Q9SRV1 | BTB/POZ and MATH domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=BPM4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1CK66 | BTB domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_032079 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology