Basic Information
Locus ID:
Oco16G004130
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Cytidylyltransferase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG16 | 4452717 | 4457634 | + | Oco16G004130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 47,775.21 Da | 40.15 | 89.95 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02173 | ECT | 264 | 412 | 7.65703E-77 | - |
| CDD | cd02174 | CCT | 68 | 206 | 4.65341E-80 | IPR041723 |
| Pfam | PF01467 | Cytidylyltransferase-like | 269 | 358 | 3.1E-16 | IPR004821 |
| Pfam | PF01467 | Cytidylyltransferase-like | 73 | 201 | 5.2E-25 | IPR004821 |
| SUPERFAMILY | SSF52374 | Nucleotidylyl transferase | 267 | 362 | 7.24E-21 | - |
| SUPERFAMILY | SSF52374 | Nucleotidylyl transferase | 71 | 204 | 1.0E-27 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 60 | 243 | 3.5E-57 | IPR014729 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 244 | 427 | 2.8E-54 | IPR014729 |
| TIGRFAM | TIGR00125 | cyt_tran_rel: cytidyltransferase-like domain | 267 | 333 | 6.1E-17 | IPR004821 |
| TIGRFAM | TIGR00125 | cyt_tran_rel: cytidyltransferase-like domain | 71 | 136 | 7.0E-19 | IPR004821 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38670.1 | phosphorylethanolamine cytidylyltransferase 1. Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis. | 0 |
| RefSeq | XP_015650484.1 | ethanolamine-phosphate cytidylyltransferase [Oryza sativa Japonica Group] | 0 |
| Q9ZVI9 | Ethanolamine-phosphate cytidylyltransferase OS=Arabidopsis thaliana OX=3702 GN=PECT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0LSH3 | ethanolamine-phosphate cytidylyltransferase OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology