Basic Information
Locus ID:
Oco16G003400
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG16 | 3505026 | 3506239 | - | Oco16G003400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.91 | 27,152.46 Da | 36.18 | 85.36 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052165884.1 | uncharacterized protein LOC127782655 [Oryza glaberrima] | 0 |
| TrEMBL | A0A0E0LRZ0 | Cation_ATPase_N domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Oryza coarctata | 3 | Oco15G003440, Oco16G003390, Oco16G003400 |
| Poaceae | Oryza sativa | 3 | LOC_Os08g08340.1, LOC_Os08g08420.1, LOC_Os08g08430.1 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr20G012150, Chr20G012180, Chr29G010510, Chr29G010530 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-38939, nbis-gene-38941, nbis-gene-38942 ... |
| Poaceae | Zoysia macrostachya | 4 | Zma_g22579, Zma_g22580, Zma_g22582, Zma_g22583 |