Basic Information
Locus ID:
Oco16G001370
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG16 | 1249223 | 1249832 | + | Oco16G001370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.71 | 16,365.70 Da | 49.68 | 93.40 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 113 | 143 | 7.8E-7 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 13 | 79 | 8.83E-5 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 107 | 143 | 6.59E-8 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 101 | 144 | 2.4E-9 | IPR011333 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 117 | 144 | 10.426773 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_015649108.1 | BTB/POZ and MATH domain-containing protein 3 [Oryza sativa Japonica Group] | 0 |
| TrEMBL | A0A0E0LQW0 | BTB domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Oco16G001370.