Basic Information
Locus ID:
Oco16G000960
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG16 | 936937 | 940018 | + | Oco16G000960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 55,193.39 Da | 47.91 | 79.54 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 370 | 515 | 1.7E-10 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 122 | 185 | 4.08E-14 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 362 | 515 | 5.79E-18 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 123 | 199 | 2.4E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 101 | 2.0E-9 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 354 | 519 | 1.1E-26 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 201 | 519 | 10.732666 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 209 | 231 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 209 | 223 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51560.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006659770.3 | somatic embryogenesis receptor kinase 1-like [Oryza brachyantha] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0LQP4 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology