Basic Information
Locus ID:
Oco16G000590
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG16 | 519301 | 521907 | + | Oco16G000590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.64 | 89,723.34 Da | 51.55 | 79.91 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 492 | 779 | 6.70745E-87 | - |
| Pfam | PF00069 | Protein kinase domain | 487 | 774 | 1.4E-43 | IPR000719 |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 215 | 238 | 7.5E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 460 | 779 | 3.37E-71 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 134 | 352 | 1.7E-15 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 468 | 571 | 1.2E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 572 | 796 | 1.5E-50 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 79 | 364 | 4.2E-21 | IPR009091 |
| SMART | SM00220 | serkin_6 | 486 | 781 | 4.5E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 486 | 781 | 39.382282 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 492 | 514 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 620 | 632 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 792 | 840 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 804 | 828 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_015648549.1 | serine/threonine-protein kinase-like protein CCR4 [Oryza sativa Japonica Group] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0LQH6 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology