Basic Information
Locus ID:
Oco16G000300
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG16 | 277580 | 285683 | + | Oco16G000300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 183,731.23 Da | 46.83 | 77.50 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1302 | 1587 | 1.60804E-134 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 179 | 449 | 1.84923E-116 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1340 | 1531 | 5.4E-32 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 193 | 438 | 2.2E-24 | IPR002423 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 245 | 415 | 2.25E-28 | IPR027409 |
| SUPERFAMILY | SSF54849 | GroEL-intermediate domain like | 199 | 435 | 3.66E-6 | IPR027410 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1277 | 1587 | 3.27E-78 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1252 | 1409 | 3.3E-32 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 244 | 415 | 2.1E-36 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1449 | 1588 | 8.5E-42 | - |
| SMART | SM00330 | PIPK_2 | 1271 | 1588 | 1.2E-80 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1236 | 1587 | 53.653202 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 624 | 640 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 87 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 88 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 608 | 651 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 507 | 527 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34260.1 | FORMS APLOID AND BINUCLEATE CELLS 1A. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_052165368.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B [Oryza glaberrima] | 0 |
| Q9XID0 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana OX=3702 GN=FAB1D PE=3 SV=1 | 0 | |
| TrEMBL | A0A6G1CHR0 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_020783 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology