Basic Information
Locus ID:
Oco15G013500
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG15 | 18686194 | 18696934 | - | Oco15G013500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 201,293.09 Da | 50.82 | 76.97 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1522 | 1784 | 6.48931E-147 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 398 | 670 | 6.03048E-142 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1561 | 1726 | 1.1E-32 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 418 | 666 | 2.3E-34 | IPR002423 |
| Pfam | PF01363 | FYVE zinc finger | 57 | 122 | 1.5E-16 | IPR000306 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1521 | 1784 | 8.5E-77 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 464 | 636 | 7.85E-44 | IPR027409 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 55 | 125 | 2.64E-19 | IPR011011 |
| Gene3D | G3DSA:3.30.810.10 | - | 1645 | 1785 | 1.2E-40 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1508 | 1642 | 5.5E-35 | IPR027484 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 47 | 138 | 2.8E-20 | IPR013083 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 463 | 636 | 5.5E-56 | IPR027409 |
| SMART | SM00330 | PIPK_2 | 1487 | 1785 | 6.4E-119 | IPR002498 |
| SMART | SM00064 | fyve_4 | 52 | 125 | 1.4E-19 | IPR000306 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1458 | 1784 | 56.12648 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 60 | 124 | 13.042163 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 169 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1197 | 1255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 169 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 50 | - | - |
| Coils | Coil | Coil | 1112 | 1132 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_015649930.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B [Oryza sativa Japonica Group] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0LVG2 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology