Basic Information
Locus ID:
Oco15G012130
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Hsp90 protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG15 | 17115813 | 17119849 | + | Oco15G012130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.77 | 75,486.47 Da | 38.91 | 83.56 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 14 | 210 | 2.0226E-90 | - |
| Pfam | PF00183 | Hsp90 protein | 211 | 657 | 7.2E-158 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 28 | 187 | 4.2E-12 | IPR003594 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 13 | 211 | 1.7E-52 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 511 | 617 | 7.98E-28 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 247 | 490 | 2.2E-77 | IPR020568 |
| Gene3D | G3DSA:3.30.565.10 | - | 12 | 235 | 7.7E-73 | IPR036890 |
| Gene3D | G3DSA:1.20.120.790 | - | 494 | 633 | 3.5E-45 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 245 | 407 | 3.7E-57 | - |
| Gene3D | G3DSA:3.40.50.11260 | - | 408 | 493 | 5.4E-31 | - |
| SMART | SM00387 | HKATPase_4 | 27 | 189 | 8.1E-8 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 11 | 671 | 1.1E-202 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 25 | 34 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 75 | 92 | 1.3E-48 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 26 | 48 | 1.3E-48 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 5 | 25 | 1.3E-48 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 177 | 194 | 1.3E-48 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 122 | 144 | 1.3E-48 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 93 | 110 | 1.3E-48 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 196 | 214 | 1.3E-48 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 1 | 633 | 22.882935 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 229 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 644 | 672 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 646 | 665 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.2 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_040382555.1 | heat shock protein 90-5, chloroplastic-like [Oryza brachyantha] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | J3MU06 | HATPase_c domain-containing protein OS=Oryza brachyantha OX=4533 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology