Basic Information
Locus ID:
Oco15G011960
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG15 | 16904483 | 16905478 | - | Oco15G011960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.40 | 37,119.05 Da | 72.42 | 78.01 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 34 | 65 | 4.8E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 28 | 64 | 1.23E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 25 | 77 | 2.6E-7 | - |
| SMART | SM00256 | fbox_2 | 31 | 73 | 2.0E-5 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 121 | 307 | 1.4E-19 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052164996.1 | F-box protein At3g07870-like [Oryza glaberrima] | 0 |
| TrEMBL | A0A6G1F3L3 | DUF295 domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_004556 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology