Basic Information
Locus ID:
Oco15G011940
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG15 | 16880556 | 16891762 | - | Oco15G011940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.86 | 48,952.33 Da | 50.87 | 67.60 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 9 | 43 | 5.0E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 6 | 45 | 2.75E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 59 | 1.5E-8 | - |
| SMART | SM00256 | fbox_2 | 9 | 49 | 3.8E-5 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 3 | 55 | 8.888098 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052164997.1 | F-box protein At3g07870-like [Oryza glaberrima] | 0 |
| TrEMBL | A0A0E0LWB8 | F-box domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology