Basic Information
Locus ID:
Oco15G010900
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
atbpm1,bpm1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG15 | 15791285 | 15803669 | - | Oco15G010900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 27,199.06 Da | 33.87 | 92.79 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 128 | 162 | 7.3E-7 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 115 | 217 | 3.69E-18 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 5 | 102 | 3.05E-8 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 165 | 246 | 2.2E-14 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 105 | 164 | 3.0E-13 | IPR011333 |
| SMART | SM00225 | BTB_4 | 135 | 218 | 2.4E-7 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 135 | 194 | 11.647012 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_015649343.1 | BTB/POZ and MATH domain-containing protein 1 [Oryza sativa Japonica Group] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A2YX70 | BTB domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_29938 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology