Basic Information
Locus ID:
Oco15G010530
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
atbpm1,bpm1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG15 | 15455956 | 15456917 | - | Oco15G010530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 33,417.93 Da | 44.91 | 92.22 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 11 | 105 | 4.88705E-12 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 127 | 228 | 7.3E-23 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 117 | 229 | 3.14E-29 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 12 | 109 | 7.03E-19 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 5 | 74 | 8.3E-7 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 232 | 297 | 1.1E-12 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 111 | 226 | 1.2E-31 | IPR011333 |
| SMART | SM00225 | BTB_4 | 135 | 232 | 4.8E-19 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 135 | 202 | 16.610691 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_052166407.1 | BTB/POZ and MATH domain-containing protein 1-like [Oryza glaberrima] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0LX10 | BTB domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology