Basic Information
Locus ID:
Oco15G009540
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| LG15 | 14420581 | 14426387 | - | Oco15G009540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 71,926.94 Da | 42.38 | 94.14 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 120 | 180 | 1.0E-10 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 329 | 600 | 1.4E-41 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 69 | 6.4E-13 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 310 | 601 | 1.13E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 193 | 6.29E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 404 | 618 | 2.2E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 301 | 403 | 7.7E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 208 | 1.3E-52 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 143 | 166 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 95 | 118 | 170.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 327 | 600 | 1.2E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 119 | 142 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 167 | 190 | 70.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 327 | 581 | 34.74633 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 333 | 355 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 446 | 458 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30520.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015651005.1 | probable LRR receptor-like serine/threonine-protein kinase At2g23950 isoform X1 [Oryza sativa Japonica Group] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1CJA3 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_028692 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology