Basic Information
Locus ID:
Oco15G008760
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG15 | 13495824 | 13502916 | - | Oco15G008760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 176,190.03 Da | 46.74 | 84.39 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 204 | 473 | 5.34666E-124 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1304 | 1564 | 1.80451E-143 | IPR044769 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1343 | 1506 | 1.5E-34 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 224 | 459 | 1.2E-28 | IPR002423 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 269 | 439 | 1.12E-35 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1299 | 1564 | 1.37E-81 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1242 | 1424 | 4.7E-37 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 268 | 439 | 1.7E-48 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1426 | 1565 | 1.8E-41 | - |
| SMART | SM00330 | PIPK_2 | 1277 | 1565 | 1.0E-113 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1246 | 1564 | 60.131714 | IPR002498 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_006659418.3 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Oryza brachyantha] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A6G1CGX9 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_015947 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology