Basic Information
Locus ID:
Oco15G008650
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG15 | 13359708 | 13361376 | - | Oco15G008650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.15 | 53,153.01 Da | 47.19 | 96.60 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 73 | 4.2E-4 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 92 | 138 | 2.5E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 292 | 394 | 1.7E-9 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 221 | 4.23E-32 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 279 | 476 | 1.18E-24 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 235 | 3.1E-40 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 398 | 490 | 3.1E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 269 | 397 | 3.4E-18 | - |
| SMART | SM00220 | serkin_6 | 270 | 476 | 0.0017 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 258 | 497 | 11.651377 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02880.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_040383098.1 | probable inactive receptor kinase RLK902 [Oryza brachyantha] | 0 |
| Q9M8T0 | Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana OX=3702 GN=At3g02880 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0ELN0 | Protein kinase domain-containing protein OS=Oryza meridionalis OX=40149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology