Basic Information
Locus ID:
Oco15G007280
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG15 | 11260910 | 11264154 | - | Oco15G007280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 103,214.63 Da | 42.28 | 105.83 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 193 | 215 | 0.36 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 676 | 889 | 7.2E-42 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 62 | 8.4E-5 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 246 | 567 | 2.28E-56 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 66 | 305 | 1.96E-46 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 672 | 951 | 9.7E-71 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 184 | 1.8E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 240 | 313 | 1.0E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 185 | 239 | 2.2E-15 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 658 | 761 | 2.5E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 762 | 968 | 2.2E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 314 | 594 | 1.0E-74 | IPR032675 |
| SMART | SM00220 | serkin_6 | 670 | 969 | 1.8E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 670 | 969 | 36.852299 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 806 | 818 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 527 | 540 | 1.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 338 | 351 | 1.5E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_006659357.2 | receptor-like protein kinase HSL1 [Oryza brachyantha] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | J3MSM2 | Protein kinase domain-containing protein OS=Oryza brachyantha OX=4533 GN=102716436 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology