Basic Information
Locus ID:
Oco15G004530
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG15 | 4739258 | 4740388 | - | Oco15G004530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.95 | 41,013.05 Da | 36.57 | 83.06 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 174 | 307 | 1.1E-22 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 161 | 307 | 7.46E-31 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 309 | 375 | 5.7E-15 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 154 | 308 | 5.9E-36 | IPR011333 |
| SMART | SM00225 | BTB_4 | 184 | 308 | 1.1E-23 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 184 | 255 | 17.686155 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_040382668.1 | BTB/POZ and MATH domain-containing protein 3-like [Oryza brachyantha] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | J3MRD0 | BTB domain-containing protein OS=Oryza brachyantha OX=4533 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology