Basic Information
Locus ID:
Oco15G004440
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG15 | 4548521 | 4550024 | - | Oco15G004440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 39,056.38 Da | 38.78 | 87.26 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 17 | 146 | 3.09706E-22 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 172 | 285 | 2.94724E-50 | - |
| Pfam | PF00651 | BTB/POZ domain | 174 | 287 | 3.9E-24 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 14 | 152 | 2.94E-25 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 161 | 286 | 1.18E-29 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 15 | 150 | 6.1E-21 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 159 | 283 | 8.5E-36 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 287 | 354 | 1.5E-19 | - |
| SMART | SM00225 | BTB_4 | 183 | 288 | 2.7E-22 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 183 | 250 | 16.38319 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 16 | 145 | 16.91349 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_052165115.1 | BTB/POZ and MATH domain-containing protein 2-like [Oryza glaberrima] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A2XR92 | BTB/POZ and MATH domain-containing protein 1-like OS=Oryza sativa subsp. indica OX=39946 GN=OsI_15151 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology