Basic Information
Locus ID:
Oco15G004430
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG15 | 4531587 | 4533414 | - | Oco15G004430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 32,690.50 Da | 32.85 | 95.71 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 26 | 159 | 7.97024E-16 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 188 | 261 | 1.4E-12 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 173 | 260 | 2.77E-18 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 22 | 165 | 2.29E-19 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 24 | 162 | 3.0E-14 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 165 | 286 | 3.9E-20 | IPR011333 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 196 | 255 | 12.494973 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 25 | 158 | 13.998567 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.2 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_052164325.1 | BTB/POZ and MATH domain-containing protein 1-like [Oryza glaberrima] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0LSI8 | BTB domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology