Basic Information
Locus ID:
Oco15G001950
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG15 | 1879401 | 1882546 | + | Oco15G001950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 105,748.94 Da | 39.70 | 98.81 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 324 | 383 | 8.1E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 696 | 980 | 3.6E-44 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 421 | 478 | 6.6E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 77 | 2.3E-8 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 106 | 119 | 1.3 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 82 | 365 | 2.27E-53 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 272 | 601 | 3.06E-66 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 695 | 983 | 3.51E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 786 | 998 | 1.2E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 342 | 610 | 2.6E-65 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 102 | 1.2E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 103 | 341 | 7.4E-66 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 697 | 785 | 7.8E-19 | - |
| SMART | SM00369 | LRR_typ_2 | 298 | 322 | 8.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 346 | 370 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 202 | 226 | 28.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 691 | 983 | 9.7E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 563 | 586 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 130 | 154 | 310.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 691 | 990 | 37.417656 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 697 | 720 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 834 | 846 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 728 | 747 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_040382876.1 | leucine-rich repeat receptor-like protein kinase TDR [Oryza brachyantha] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1CL00 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_031610 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology