Basic Information
Locus ID:
Oco15G000850
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG15 | 844141 | 848011 | + | Oco15G000850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.30 | 75,927.36 Da | 38.15 | 91.18 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 446 | 710 | 5.23577E-89 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 41 | 83 | 1.2E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 183 | 242 | 1.8E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 445 | 710 | 4.4E-33 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 415 | 710 | 2.45E-52 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 42 | 252 | 5.29E-45 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 40 | 196 | 1.7E-43 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 402 | 518 | 1.8E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 197 | 266 | 1.1E-17 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 519 | 714 | 1.4E-38 | - |
| SMART | SM00369 | LRR_typ_2 | 157 | 181 | 7.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 109 | 133 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 205 | 229 | 35.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 440 | 714 | 27.142239 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 298 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 327 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51560.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006659770.3 | somatic embryogenesis receptor kinase 1-like [Oryza brachyantha] | 0 |
| Q94F62 | BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=BAK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6G1E254 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_026163 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology