Basic Information
Locus ID:
Oco15G000450
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG15 | 442180 | 444923 | + | Oco15G000450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.08 | 89,320.58 Da | 48.44 | 79.67 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 491 | 780 | 1.32943E-86 | - |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 210 | 233 | 2.6E-5 | - |
| Pfam | PF00069 | Protein kinase domain | 486 | 711 | 4.1E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 462 | 780 | 3.64E-71 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 130 | 311 | 6.54E-16 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 570 | 798 | 4.6E-51 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 88 | 352 | 2.6E-20 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 453 | 569 | 3.9E-30 | - |
| SMART | SM00220 | serkin_6 | 485 | 782 | 7.9E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 485 | 782 | 39.000664 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 618 | 630 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 491 | 513 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 792 | 839 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 804 | 818 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_040382465.1 | serine/threonine-protein kinase-like protein CCR4 [Oryza brachyantha] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1CF37 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_005820 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology