Basic Information
Locus ID:
Oco14G015980
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the monovalent cation proton antiporter 1 (CPA1) transporter (TC 2.A.36) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG14 | 19937792 | 19943021 | + | Oco14G015980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 59,340.86 Da | 36.90 | 110.56 | 0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 29 | 443 | 1.9E-59 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 146 | 198 | 8.6E-15 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 25 | 447 | 2.0E-78 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 85 | 96 | 2.0E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 99 | 113 | 2.0E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 114 | 122 | 2.0E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 154 | 164 | 2.0E-11 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_006658079.1 | sodium/hydrogen exchanger 2 [Oryza brachyantha] | 0 |
| Q9SXJ8 | Sodium/hydrogen exchanger 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHX1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6G1D614 | Sodium/hydrogen exchanger OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_020494 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology