Basic Information
Locus ID:
Oco14G014860
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Lipopolysaccharide kinase (Kdo/WaaP) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG14 | 19024487 | 19030381 | - | Oco14G014860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.96 | 65,575.40 Da | 45.13 | 86.05 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 138 | 400 | 1.73333E-129 | - |
| Pfam | PF00069 | Protein kinase domain | 139 | 401 | 1.1E-68 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 137 | 443 | 1.03E-80 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 429 | 583 | 1.13E-18 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 228 | 411 | 3.3E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 132 | 227 | 4.0E-22 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 412 | 584 | 5.5E-17 | - |
| SMART | SM00220 | serkin_6 | 139 | 401 | 9.9E-95 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 139 | 401 | 49.615299 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 443 | 478 | 8.990116 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 263 | 275 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 145 | 171 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 91 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41140.1 | CDPK-related kinase 1. Encodes CDPK-related kinase 1 (CRK1). | 0 |
| RefSeq | XP_040381867.1 | calcium/calmodulin-dependent serine/threonine-protein kinase 1-like [Oryza brachyantha] | 0 |
| Q10KY3 | Calcium/calmodulin-dependent serine/threonine-protein kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CAMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J5SSM4 | Protein kinase domain-containing protein OS=Zizania palustris OX=103762 GN=GUJ93_ZPchr0007g3812 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology