Basic Information
Locus ID:
Oco14G012750
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG14 | 17248628 | 17252677 | + | Oco14G012750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.01 | 115,937.86 Da | 38.49 | 104.43 | 0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 810 | 1078 | 1.30476E-91 | - |
| Pfam | PF13516 | Leucine Rich repeat | 376 | 391 | 0.21 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 164 | 200 | 1.6E-6 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 215 | 237 | 0.11 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 806 | 1003 | 4.2E-42 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 589 | 649 | 9.9E-11 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 567 | 588 | 1.6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 49 | 86 | 2.1E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 784 | 1075 | 2.56E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 109 | 678 | 4.25E-68 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 210 | 298 | 2.0E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 439 | 701 | 5.1E-52 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 768 | 879 | 1.8E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 46 | 209 | 3.9E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 302 | 428 | 6.0E-21 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 880 | 1084 | 7.0E-55 | - |
| SMART | SM00369 | LRR_typ_2 | 165 | 186 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 660 | 684 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 140 | 164 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 261 | 285 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 187 | 211 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 213 | 237 | 220.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 804 | 1082 | 4.0E-34 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 588 | 611 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 612 | 635 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 636 | 659 | 30.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 804 | 1086 | 39.311615 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 810 | 832 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 924 | 936 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 612 | 625 | 2.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 166 | 179 | 2.5E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_015647499.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Oryza sativa Japonica Group] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0QAW0 | Protein kinase domain-containing protein OS=Oryza rufipogon OX=4529 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology