Basic Information
Locus ID:
Oco14G011580
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG14 | 15989593 | 15993914 | + | Oco14G011580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.16 | 53,574.00 Da | 34.04 | 85.63 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 31 | 352 | 6.3E-73 | IPR000490 |
| Pfam | PF07983 | X8 domain | 369 | 440 | 1.4E-15 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 31 | 352 | 2.19E-79 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 30 | 358 | 3.3E-111 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 366 | 459 | 5.9E-8 | - |
| SMART | SM00768 | X8_cls | 368 | 453 | 8.9E-39 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_015694700.2 | glucan endo-1,3-beta-glucosidase 4-like [Oryza brachyantha] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | J3MMC5 | X8 domain-containing protein OS=Oryza brachyantha OX=4533 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology