Basic Information
Locus ID:
Oco14G011240
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Sugar (and other) transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG14 | 15713755 | 15718715 | - | Oco14G011240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 52,511.09 Da | 36.04 | 111.20 | 0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00083 | Sugar (and other) transporter | 353 | 483 | 1.3E-6 | IPR005828 |
| Pfam | PF00083 | Sugar (and other) transporter | 64 | 225 | 2.1E-30 | IPR005828 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 13 | 483 | 1.96E-63 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 23 | 485 | 8.5E-75 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 29 | 480 | 39.068558 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 83 | 100 | - | IPR005829 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13050.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_015647117.2 | organic cation/carnitine transporter 7 [Oryza sativa Japonica Group] | 0 |
| Q940M4 | Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana OX=3702 GN=OCT7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6G1D0T1 | MFS domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_008953 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology