Basic Information
Locus ID:
Oco14G011030
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG14 | 15496262 | 15500527 | - | Oco14G011030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.80 | 61,866.77 Da | 35.24 | 81.28 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 71 | 329 | 1.17105E-141 | - |
| CDD | cd00051 | EFh | 449 | 511 | 2.00023E-16 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 72 | 330 | 9.0E-77 | IPR000719 |
| Pfam | PF13833 | EF-hand domain pair | 404 | 440 | 6.9E-5 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 448 | 511 | 8.8E-15 | IPR002048 |
| Pfam | PF13202 | EF hand | 378 | 399 | 7.6E-4 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 358 | 536 | 3.06E-41 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 71 | 342 | 9.71E-88 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 158 | 338 | 4.2E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 339 | 513 | 1.1E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 75 | 157 | 1.7E-30 | - |
| SMART | SM00054 | efh_1 | 413 | 441 | 1.4 | IPR002048 |
| SMART | SM00054 | efh_1 | 377 | 405 | 0.0017 | IPR002048 |
| SMART | SM00054 | efh_1 | 485 | 513 | 1.2E-6 | IPR002048 |
| SMART | SM00220 | serkin_6 | 72 | 330 | 6.5E-102 | IPR000719 |
| SMART | SM00054 | efh_1 | 449 | 477 | 0.54 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 373 | 408 | 13.230217 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 409 | 444 | 9.101698 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 72 | 330 | 49.601166 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 445 | 480 | 11.807551 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 481 | 516 | 14.569197 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 422 | 434 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 192 | 204 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 386 | 398 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 494 | 506 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 78 | 101 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 458 | 470 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 55 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 38 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 0 |
| RefSeq | XP_006657859.1 | calcium-dependent protein kinase 20 [Oryza brachyantha] | 0 |
| Q84SL0 | Calcium-dependent protein kinase 20 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0E0LMD9 | Calcium-dependent protein kinase 24 OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology