Basic Information
Locus ID:
Oco14G009690
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG14 | 13907347 | 13910562 | + | Oco14G009690 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 74,440.37 Da | 45.80 | 90.46 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 357 | 622 | 8.05421E-91 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 36 | 126 | 9.6E-18 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 163 | 252 | 1.4E-9 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 352 | 615 | 3.2E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 331 | 620 | 6.34E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 313 | 426 | 6.5E-34 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 149 | 256 | 1.6E-14 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 427 | 629 | 2.5E-60 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 32 | 130 | 7.3E-22 | IPR038408 |
| SMART | SM00220 | serkin_6 | 351 | 637 | 2.1E-37 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 26 | 130 | 18.760927 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 145 | 256 | 13.72796 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 351 | 635 | 38.873459 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 472 | 484 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 357 | 380 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23130.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 5. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_052163284.1 | cysteine-rich receptor-like protein kinase 44 [Oryza glaberrima] | 0 |
| Q0D5R3 | Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D9WZW1 | Cysteine-rich receptor-like protein kinase 10 OS=Leersia perrieri OX=77586 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology