Basic Information
Locus ID:
Oco14G008810
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG14 | 12831502 | 12839675 | + | Oco14G008810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 57,324.24 Da | 37.84 | 90.02 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 47 | 374 | 1.8E-62 | IPR000490 |
| Pfam | PF07983 | X8 domain | 392 | 463 | 1.0E-20 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 47 | 374 | 4.82E-77 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 386 | 501 | 8.6E-13 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 46 | 380 | 2.8E-100 | - |
| SMART | SM00768 | X8_cls | 391 | 476 | 1.6E-48 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 288 | 301 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_015647992.1 | glucan endo-1,3-beta-glucosidase 1 isoform X1 [Oryza sativa Japonica Group] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A6G1BNN0 | X8 domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_026963 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology