Basic Information
Locus ID:
Oco14G005930
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG14 | 7393035 | 7394069 | - | Oco14G005930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.30 | 38,287.49 Da | 62.81 | 83.89 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 38 | 291 | 1.62125E-119 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 33 | 291 | 2.9E-58 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 12 | 291 | 1.2E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 19 | 116 | 5.6E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 118 | 300 | 7.7E-57 | - |
| SMART | SM00220 | serkin_6 | 32 | 298 | 2.2E-54 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 2 | 301 | 4.4E-69 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 32 | 299 | 39.650829 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 157 | 169 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 199 | 209 | 1.4E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 113 | 126 | 1.4E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 151 | 169 | 1.4E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 218 | 240 | 1.4E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 262 | 284 | 1.4E-16 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G62400.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_052146783.1 | serine/threonine/tyrosine-protein kinase HT1-like [Oryza glaberrima] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1D112 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_012019 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology