Basic Information
Locus ID:
Oco14G002790
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG14 | 2939122 | 2946385 | + | Oco14G002790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.41 | 71,185.59 Da | 65.59 | 40.39 | -1.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01926 | cyclophilin_ABH_like | 8 | 174 | 7.22281E-99 | - |
| Pfam | PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 12 | 174 | 1.2E-45 | IPR002130 |
| SUPERFAMILY | SSF50891 | Cyclophilin-like | 5 | 178 | 5.7E-71 | IPR029000 |
| Gene3D | G3DSA:2.40.100.10 | - | 1 | 183 | 4.7E-78 | IPR029000 |
| ProSiteProfiles | PS50072 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 11 | 175 | 43.227791 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 123 | 135 | 7.7E-32 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 108 | 123 | 7.7E-32 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 136 | 151 | 7.7E-32 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 65 | 77 | 7.7E-32 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 28 | 43 | 7.7E-32 | IPR002130 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 643 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 388 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 624 | 643 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 595 | 609 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 325 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 229 | 257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 210 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 545 | 559 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 389 | 404 | - | - |
| Coils | Coil | Coil | 179 | 199 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63400.1 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein. | 0 |
| RefSeq | XP_006657500.1 | peptidyl-prolyl cis-trans isomerase CYP63-like [Oryza brachyantha] | 0 |
| Q9LY75 | Peptidyl-prolyl cis-trans isomerase CYP63 OS=Arabidopsis thaliana OX=3702 GN=CYP63 PE=1 SV=1 | 0 | |
| TrEMBL | J3MJ03 | PPIase cyclophilin-type domain-containing protein OS=Oryza brachyantha OX=4533 GN=102722229 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology