Basic Information
Locus ID:
Oco14G002160
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG14 | 2362099 | 2364831 | + | Oco14G002160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 17,984.27 Da | 53.57 | 81.14 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02298 | Plastocyanin-like domain | 38 | 92 | 1.2E-11 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 38 | 99 | 7.46E-15 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 27 | 109 | 3.0E-16 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 1 | 101 | 19.729706 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052161606.1 | blue copper protein 1b-like [Oryza glaberrima] | 0 |
| TrEMBL | A0A0E0AG58 | Phytocyanin domain-containing protein OS=Oryza glumipatula OX=40148 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology