Basic Information
Locus ID:
Oco13G013850
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG13 | 19562910 | 19569876 | - | Oco13G013850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.80 | 51,260.33 Da | 55.82 | 95.70 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 201 | 239 | 2.5E-7 | IPR001752 |
| Pfam | PF00225 | Kinesin motor domain | 52 | 178 | 7.6E-31 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 46 | 275 | 2.13E-51 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 36 | 256 | 4.9E-55 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 4 | 247 | 2.0E-17 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 1 | 239 | 31.043343 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 189 | 210 | 3.5E-10 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 166 | 184 | 3.5E-10 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 133 | 150 | 3.5E-10 | IPR001752 |
| Coils | Coil | Coil | 246 | 273 | - | - |
| Coils | Coil | Coil | 313 | 340 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17360.1 | phragmoplast orienting kinesin 1. PHRAGMOPLAST ORIENTING KINESIN 1 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK1 constructs were more limited than those for POK2; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_052162146.1 | kinesin-like protein KIN-12E isoform X2 [Oryza glaberrima] | 0 |
| B9FUF9 | Kinesin-like protein KIN-12E OS=Oryza sativa subsp. japonica OX=39947 GN=KIN12E PE=2 SV=2 | 0 | |
| TrEMBL | J3MNE2 | Kinesin-like protein OS=Oryza brachyantha OX=4533 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology