Basic Information
Locus ID:
Oco13G012890
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG13 | 18754799 | 18760455 | - | Oco13G012890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.98 | 67,112.02 Da | 51.45 | 84.49 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 143 | 405 | 2.18946E-130 | - |
| Pfam | PF00069 | Protein kinase domain | 145 | 406 | 9.4E-70 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 437 | 587 | 2.67E-15 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 143 | 433 | 3.24E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 431 | 585 | 1.0E-16 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 137 | 233 | 2.7E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 234 | 417 | 2.3E-60 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 425 | 515 | 1.0E-16 | - |
| SMART | SM00220 | serkin_6 | 144 | 406 | 4.7E-99 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 144 | 406 | 51.410316 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 150 | 176 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 268 | 280 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 104 | 124 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 84 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_040381882.1 | CDPK-related kinase 5-like [Oryza brachyantha] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0LNG0 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology