Basic Information
Locus ID:
Oco13G011990
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG13 | 18077501 | 18081171 | + | Oco13G011990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 116,241.84 Da | 42.74 | 102.63 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 812 | 1080 | 1.04549E-92 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 569 | 590 | 1.6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 50 | 88 | 1.9E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 809 | 1005 | 2.9E-42 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 591 | 651 | 1.4E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 216 | 276 | 2.8E-7 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 378 | 393 | 0.21 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 144 | 202 | 3.6E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 784 | 1078 | 3.37E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 52 | 420 | 4.59E-56 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 317 | 676 | 8.63E-44 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 882 | 1086 | 1.2E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 769 | 881 | 6.7E-28 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 303 | 480 | 6.3E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 109 | 302 | 7.4E-54 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 46 | 108 | 9.4E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 494 | 705 | 2.3E-50 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 638 | 661 | 59.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 142 | 165 | 60.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 263 | 287 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 614 | 637 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 590 | 613 | 88.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 189 | 213 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 215 | 239 | 220.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 806 | 1084 | 1.8E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 806 | 1087 | 39.368149 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 926 | 938 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 812 | 834 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 168 | 181 | 3.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 614 | 627 | 3.9E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_015647499.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Oryza sativa Japonica Group] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0QAW0 | Protein kinase domain-containing protein OS=Oryza rufipogon OX=4529 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology