halophFGD

Basic Information

Locus ID: Oco13G009530

Species & Taxonomic ID: Oryza coarctata & 77588

Genome Assembly: GCA_030770085.1

Description: F-box FBD LRR-repeat protein At4g03220

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
LG13	15368025	15369590	-	Oco13G009530

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.64	12,815.06 Da	74.69	111.12	0.04

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_015646340.2	uncharacterized protein LOC9267496 [Oryza sativa Japonica Group]	0
TrEMBL	Q8GVW9	Uncharacterized protein OJ1612_A04.131 OS=Oryza sativa subsp. japonica OX=39947 GN=OJ1612_A04.131 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	17	AH03.2980, AH03.3016, AH03.3734, BH03.3179, BH03.3186 ... BH03.4012, BH03.4013, BH03.4260, CH02.1632, CH03.3342, CH03.3348, CH03.3349, CH03.3358, CH03.3373, CH03.4281, CH07.236, CH07.241
Poaceae	Eleusine coracana subsp. coracana	13	gene-QOZ80_1AG0040150, gene-QOZ80_5AG0362280 ... gene-QOZ80_7AG0567200, gene-QOZ80_7AG0567380, gene-QOZ80_7AG0567490, gene-QOZ80_7AG0577600, gene-QOZ80_7BG0598680, gene-QOZ80_7BG0598840, gene-QOZ80_7BG0598930, gene-QOZ80_7BG0601540, gene-QOZ80_8AG0640840, gene-QOZ80_8AG0640850, gene-QOZ80_8BG0643680
Poaceae	Hordeum vulgare	14	HORVU.MOREX.r3.1HG0084540.1, HORVU.MOREX.r3.2HG0195010.1 ... HORVU.MOREX.r3.2HG0188030.1.CDS1, HORVU.MOREX.r3.4HG0395670.1, HORVU.MOREX.r3.4HG0415360.1, HORVU.MOREX.r3.4HG0418200.1, HORVU.MOREX.r3.6HG0632570.1, HORVU.MOREX.r3.7HG0731450.1, HORVU.MOREX.r3.7HG0737880.1, HORVU.MOREX.r3.7HG0745040.1.CDS1, HORVU.MOREX.r3.7HG0745200.1, HORVU.MOREX.r3.7HG0745250.1, HORVU.MOREX.r3.7HG0745320.1, HORVU.MOREX.r3.7HG0745500.1
Poaceae	Lolium multiflorum	36	gene-QYE76_000424, gene-QYE76_001664, gene-QYE76_003032 ... gene-QYE76_006384, gene-QYE76_006396, gene-QYE76_006472, gene-QYE76_006476, gene-QYE76_025646, gene-QYE76_026198, gene-QYE76_036283, gene-QYE76_036711, gene-QYE76_036712, gene-QYE76_036713, gene-QYE76_036716, gene-QYE76_036719, gene-QYE76_036720, gene-QYE76_041359, gene-QYE76_049657, gene-QYE76_059691, gene-QYE76_059693, gene-QYE76_060055, gene-QYE76_071578, gene-QYE76_071580, gene-QYE76_071595, gene-QYE76_071600, gene-QYE76_071606, gene-QYE76_071634, gene-QYE76_071635, gene-QYE76_071697, gene-QYE76_071698, gene-QYE76_071704, gene-QYE76_071731, gene-QYE76_071733, gene-QYE76_071734, gene-QYE76_071799, gene-QYE76_071861
Poaceae	Oryza coarctata	1	Oco13G009530
Poaceae	Oryza sativa	1	LOC_Os12g36000.1
Poaceae	Paspalum vaginatum	4	gene-BS78_02G277100, gene-BS78_02G277800 ... gene-BS78_02G277900, gene-BS78_06G208700
Poaceae	Puccinellia tenuiflora	18	Pt_Chr0100991, Pt_Chr0100992, Pt_Chr0106729, Pt_Chr0106914 ... Pt_Chr0106915, Pt_Chr0300155, Pt_Chr0303262, Pt_Chr0303312, Pt_Chr0306558, Pt_Chr0401318, Pt_Chr0401613, Pt_Chr0401615, Pt_Chr0401618, Pt_Chr0401619, Pt_Chr0401620, Pt_Chr0401621, Pt_Chr0404054, Pt_Chr0701494
Poaceae	Sporobolus alterniflorus	4	Chr0G002260, Chr24G005000, Chr28G006610, Chr28G006620
Poaceae	Thinopyrum elongatum	23	Tel2E01G573100, Tel2E01G761200, Tel2E01G785900 ... Tel3E01G652100, Tel4E01G552600, Tel4E01G597600, Tel4E01G598200, Tel5E01G045400, Tel5E01G104300, Tel6E01G160800, Tel7E01G598300, Tel7E01G806500, Tel7E01G808300, Tel7E01G808800, Tel7E01G810100, Tel7E01G851100, Tel7E01G899500, Tel7E01G901500, Tel7E01G901700, Tel7E01G901900, Tel7E01G902000, Tel7E01G902100, Tel7E01G902900
Poaceae	Triticum dicoccoides	18	gene_TRIDC2AG047970, gene_TRIDC2BG050460 ... gene_TRIDC2BG071150, gene_TRIDC4BG060960, gene_TRIDC4BG060990, gene_TRIDC5AG075660, gene_TRIDC5AG075680, gene_TRIDC5BG008230, gene_TRIDC5BG078890, gene_TRIDC7AG072750, gene_TRIDC7AG072880, gene_TRIDC7AG072920, gene_TRIDC7BG041510, gene_TRIDC7BG060240, gene_TRIDC7BG060300, gene_TRIDC7BG068870, gene_TRIDC7BG068910, gene_TRIDC7BG069090
Poaceae	Triticum aestivum	52	TraesCS2A02G333300.1, TraesCS2A02G465500.1 ... TraesCS2B02G469900.1, TraesCS2B02G487000.1, TraesCS2B02G487100.1, TraesCS2D02G327500.1, TraesCS2D02G448100.1, TraesCS2D02G465900.2, TraesCS3A02G410300.1, TraesCS3A02G410400.1, TraesCS3B02G443700.1, TraesCS3D02G405000.1, TraesCS3D02G405100.1, TraesCS4B02G364600.1, TraesCS4B02G365200.1, TraesCS4B02G365300.1, TraesCS4B02G393800.1, TraesCS5A02G533800.3, TraesCS5B02G049300.1, TraesCS5D02G055200.1, TraesCS6A02G066700.1, TraesCS7A02G374600.1, TraesCS7A02G497700.1, TraesCS7A02G518600.1, TraesCS7A02G518700.1, TraesCS7A02G519100.1, TraesCS7A02G519300.1, TraesCS7A02G519400.1, TraesCS7A02G519900.1, TraesCS7B02G225700.1, TraesCS7B02G252800.1, TraesCS7B02G379200.1, TraesCS7B02G433600.1.cds1, TraesCS7B02G434600.1, TraesCS7B02G434900.1, TraesCS7B02G435200.1, TraesCS7B02G435400.1, TraesCS7B02G436000.1, TraesCS7B02G436300.1, TraesCS7D02G141800.1, TraesCS7D02G321600.1, TraesCS7D02G464500.1, TraesCS7D02G465100.1, TraesCS7D02G485000.1, TraesCS7D02G508300.1, TraesCS7D02G508500.1, TraesCS7D02G508600.1, TraesCS7D02G509000.1, TraesCS7D02G509600.1, TraesCSU02G117400.1, TraesCSU02G138500.1, TraesCSU02G139200.1
Poaceae	Zea mays	1	Zm00001eb105050_P001
Poaceae	Zoysia japonica	3	nbis-gene-1023, nbis-gene-32928, nbis-gene-32976
Poaceae	Zoysia macrostachya	2	Zma_g5574, Zma_g6436