Basic Information
Locus ID:
Oco13G009480
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG13 | 15326951 | 15330507 | + | Oco13G009480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 22,723.11 Da | 52.27 | 96.45 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 55 | 173 | 3.49E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 186 | 4.0E-7 | IPR032675 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021308921.1 | F-box protein At5g03100 isoform X1 [Sorghum bicolor] | 0 |
| TrEMBL | A0A0D9X016 | F-box domain-containing protein OS=Leersia perrieri OX=77586 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH03.3291, BH03.2786, CH03.2982, CH03.3687 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_6AG0529460 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_006671, gene-QYE76_006674, gene-QYE76_006679 |
| Poaceae | Oryza coarctata | 1 | Oco13G009480 |
| Poaceae | Oryza sativa | 1 | LOC_Os12g41300.1 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G493500 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G307800.1, TraesCS5B02G308000.1.cds1 ... |