Basic Information
Locus ID:
Oco13G007680
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG13 | 13021655 | 13026039 | + | Oco13G007680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.08 | 35,853.06 Da | 43.96 | 93.19 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 32 | 84 | 1.7E-5 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 31 | 311 | 2.03E-20 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 17 | 91 | 3.1E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 189 | 313 | 8.3E-10 | - |
| SMART | SM00219 | tyrkin_6 | 31 | 313 | 2.4E-4 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 21 | 313 | 12.810365 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 228 | 240 | - | IPR008266 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23190.2 | - | 0 |
| RefSeq | XP_052161213.1 | wall-associated receptor kinase-like 4 isoform X1 [Oryza glaberrima] | 0 |
| Q9ZP16 | Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana OX=3702 GN=CRK11 PE=2 SV=2 | 0 | |
| TrEMBL | B9FXB7 | Protein kinase domain-containing protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_24319 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Oco13G007680.