Basic Information
Locus ID:
Oco13G007120
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
ACT domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG13 | 12232128 | 12243158 | - | Oco13G007120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.56 | 36,893.35 Da | 42.17 | 92.01 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 53 | 295 | 2.66221E-129 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 47 | 293 | 6.5E-69 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 27 | 292 | 3.64E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 126 | 322 | 5.0E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 34 | 125 | 8.3E-28 | - |
| SMART | SM00220 | serkin_6 | 47 | 294 | 4.0E-67 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 8 | 315 | 7.1E-67 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 47 | 302 | 44.060638 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 164 | 176 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 158 | 176 | 4.5E-18 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 203 | 213 | 4.5E-18 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 222 | 244 | 4.5E-18 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 266 | 288 | 4.5E-18 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 121 | 134 | 4.5E-18 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 323 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G35780.1 | ACT-like protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_015647398.1 | serine/threonine-protein kinase STY17 isoform X2 [Oryza sativa Japonica Group] | 0 |
| Q8RWL6 | Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana OX=3702 GN=STY17 PE=1 SV=1 | 0 | |
| TrEMBL | Q0D6I5 | Os07g0475900 protein OS=Oryza sativa subsp. japonica OX=39947 GN=P0571D04.125 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology