Basic Information
Locus ID:
Oco13G005450
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG13 | 7718839 | 7720202 | - | Oco13G005450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 10,871.22 Da | 58.38 | 51.11 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 38 | 68 | 8.7522E-4 | - |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 37 | 75 | 3.93E-7 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 3 | 40 | 1.3E-6 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 41 | 79 | 7.6E-8 | - |
| SMART | SM00179 | egfca_6 | 38 | 78 | 4.5E-5 | IPR001881 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 38 | 63 | - | IPR018097 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16260.3 | - | 0 |
| RefSeq | XP_015694614.2 | putative wall-associated receptor kinase-like 16 [Oryza brachyantha] | 0 |
| Q9SA25 | Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana OX=3702 GN=WAKL8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0EAL9 | Protein kinase domain-containing protein OS=Oryza meridionalis OX=40149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg36390, jg4144 |
| Poaceae | Echinochloa crus-galli | 1 | CH03.2757 |
| Poaceae | Oryza coarctata | 1 | Oco13G005450 |