Basic Information
Locus ID:
Oco13G003740
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
galactinol--sucrose galactosyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG13 | 4201412 | 4206212 | + | Oco13G003740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 60,011.40 Da | 39.58 | 84.17 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05691 | Raffinose synthase or seed imbibition protein Sip1 | 134 | 210 | 2.8E-15 | IPR008811 |
| Pfam | PF05691 | Raffinose synthase or seed imbibition protein Sip1 | 500 | 544 | 5.6E-9 | IPR008811 |
| Pfam | PF05691 | Raffinose synthase or seed imbibition protein Sip1 | 100 | 133 | 7.8E-10 | IPR008811 |
| Pfam | PF05691 | Raffinose synthase or seed imbibition protein Sip1 | 212 | 380 | 1.1E-62 | IPR008811 |
| Pfam | PF05691 | Raffinose synthase or seed imbibition protein Sip1 | 384 | 497 | 5.4E-34 | IPR008811 |
| Pfam | PF05691 | Raffinose synthase or seed imbibition protein Sip1 | 8 | 65 | 8.3E-6 | IPR008811 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 138 | 385 | 4.63E-22 | IPR017853 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 94 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57520.1 | seed imbibition 2. | 0 |
| RefSeq | XP_052161569.1 | probable galactinol--sucrose galactosyltransferase 2 [Oryza glaberrima] | 0 |
| Q94A08 | Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=RFS2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6G1D409 | galactinol--sucrose galactosyltransferase OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_014698 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology