Basic Information
Locus ID:
Oco13G002580
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG13 | 2764188 | 2770202 | + | Oco13G002580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.59 | 71,858.56 Da | 67.39 | 40.39 | -1.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01926 | cyclophilin_ABH_like | 8 | 174 | 1.79284E-97 | - |
| Pfam | PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 13 | 174 | 5.3E-43 | IPR002130 |
| SUPERFAMILY | SSF50891 | Cyclophilin-like | 4 | 178 | 1.18E-68 | IPR029000 |
| Gene3D | G3DSA:2.40.100.10 | - | 1 | 183 | 8.6E-76 | IPR029000 |
| ProSiteProfiles | PS50072 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 11 | 175 | 42.440266 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 108 | 123 | 9.1E-32 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 65 | 77 | 9.1E-32 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 28 | 43 | 9.1E-32 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 136 | 151 | 9.1E-32 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 123 | 135 | 9.1E-32 | IPR002130 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 403 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 298 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 560 | 583 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 209 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 462 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 324 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 412 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 600 | 622 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 228 | 256 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 508 | 648 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 629 | 648 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 534 | 559 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 361 | 386 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 428 | 464 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63400.2 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein. | 0 |
| RefSeq | XP_052161589.1 | peptidyl-prolyl cis-trans isomerase CYP63-like isoform X1 [Oryza glaberrima] | 0 |
| Q9LY75 | Peptidyl-prolyl cis-trans isomerase CYP63 OS=Arabidopsis thaliana OX=3702 GN=CYP63 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D3GMY0 | PPIase cyclophilin-type domain-containing protein OS=Oryza barthii OX=65489 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology